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ONTOLOGY REPORT - ANNOTATIONS


Term:ribonucleoside diphosphate metabolic process
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Accession:GO:0009185 term browser browse the term
Definition:The chemical reactions and pathways involving a ribonucleoside diphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: ribonucleoside diphosphate metabolism


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ribonucleoside diphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rrm1 ribonucleotide reductase catalytic subunit M1 involved_in ISO (PMID:16376858)
(MGI:6810812|PMID:12578384)
ComplexPortal PMID:12578384 PMID:16376858 MGI:6810812 NCBI chrNW_004624817:5,523,648...5,568,997
Ensembl chrNW_004624817:5,523,665...5,568,994
JBrowse link
G Rrm2 ribonucleotide reductase regulatory subunit M2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624865:4,984,353...4,990,187
Ensembl chrNW_004624865:4,985,620...4,990,120
JBrowse link
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in ISO (PMID:16376858) ComplexPortal PMID:16376858 NCBI chrNW_004624763:19,362,793...19,391,401
Ensembl chrNW_004624763:19,362,663...19,391,443
JBrowse link
ADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 involved_in ISO
IEA
RGD
UniProt
PMID:19049516 GO_REF:0000104 RGD:5134369 NCBI chrNW_004624760:7,684,098...7,693,051
Ensembl chrNW_004624760:7,684,109...7,693,405
JBrowse link
G Ak2 adenylate kinase 2 involved_in ISO
IEA
RGD
InterPro
UniProt
PMID:5123889 GO_REF:0000002 GO_REF:0000104 RGD:5490208 NCBI chrNW_004624764:16,089,357...16,113,275 JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:5010295 PMID:5123889 RGD:5490208 RGD:5490216 NCBI chrNW_004624736:9,428,736...9,494,645 JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd3 adenosine monophosphate deaminase 3 involved_in ISO (PMID:28746349) MGI PMID:28746349 NCBI chrNW_004624766:2,542,021...2,586,912
Ensembl chrNW_004624766:2,545,932...2,587,025
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in ISO (PMID:17502665) MGI PMID:17502665 NCBI chrNW_004624737:7,011,792...7,193,903
Ensembl chrNW_004624737:7,084,818...7,191,918
JBrowse link
G Nt5e 5'-nucleotidase ecto involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624799:8,766,608...8,845,296
Ensembl chrNW_004624799:8,765,711...8,845,778
JBrowse link
G Nudt9 nudix hydrolase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11825615) Ensembl
MGI
PMID:11825615 GO_REF:0000107 NCBI chrNW_004624872:3,928,078...3,962,030
Ensembl chrNW_004624872:3,928,146...3,962,030
JBrowse link
ADP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd3 adenosine monophosphate deaminase 3 involved_in
acts_upstream_of_or_within
ISO (MGI:5529149|PMID:23078545)
(PMID:23439682)
CACAO
MGI
PMID:23078545 PMID:23439682 MGI:5529149 NCBI chrNW_004624766:2,542,021...2,586,912
Ensembl chrNW_004624766:2,545,932...2,587,025
JBrowse link
G Bad BCL2 associated agonist of cell death involved_in ISO (MGI:3778846|PMID:18223655) UniProt PMID:18223655 MGI:3778846 NCBI chrNW_004624767:22,025,721...22,037,283
Ensembl chrNW_004624767:22,026,133...22,037,277
JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoa aldolase, fructose-bisphosphate A involved_in ISO (PMID:28049690) MGI PMID:28049690 NCBI chrNW_004624782:13,183,924...13,189,286 JBrowse link
G Eno1 enolase 1 involved_in ISO (PMID:3529090)
PMID:15041191
(PMID:29775581)
CAFA
UniProt
PMID:3529090 PMID:15041191 PMID:29775581 RGD:2302788 NCBI chrNW_004624818:3,223,384...3,235,128
Ensembl chrNW_004624818:3,223,308...3,238,419
JBrowse link
G Eno2 enolase 2 involved_in ISO PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chrNW_004624860:3,553,936...3,561,343
Ensembl chrNW_004624860:3,553,947...3,564,294
JBrowse link
G Eno3 enolase 3 involved_in ISO (PMID:27760309) MGI PMID:27760309 NCBI chrNW_004624786:8,807,498...8,813,561
Ensembl chrNW_004624786:8,807,450...8,813,951
JBrowse link
G Foxk1 forkhead box K1 acts_upstream_of ISO (PMID:30700909) UniProt PMID:30700909 NCBI chrNW_004624740:28,533,708...28,585,880
Ensembl chrNW_004624740:28,538,745...28,585,886
JBrowse link
G Foxk2 forkhead box K2 acts_upstream_of ISO (MGI:6281052|PMID:30700909) UniProt PMID:30700909 MGI:6281052 NCBI chrNW_004624801:11,260,838...11,303,656
Ensembl chrNW_004624801:11,260,836...11,304,773
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:10777777), (PMID:28918937)
(PMID:12581789)
MGI PMID:10777777 PMID:12581789 PMID:28918937 NCBI chrNW_004624860:3,257,805...3,261,736
Ensembl chrNW_004624860:3,257,853...3,261,735
JBrowse link
G Hk1 hexokinase 1 involved_in ISO (PMID:4275392) MGI PMID:4275392 NCBI chrNW_004624754:3,594,478...3,656,231
Ensembl chrNW_004624754:3,591,090...3,659,760
JBrowse link
G Pfkl phosphofructokinase, liver type involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624745:29,826,202...29,842,859
Ensembl chrNW_004624745:29,823,317...29,842,881
JBrowse link
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19696889) TreeGrafter
MGI
PMID:19696889 GO_REF:0000118 NCBI chrNW_004624816:4,132,511...4,156,809
Ensembl chrNW_004624816:4,131,752...4,156,749
JBrowse link
G Pfkp phosphofructokinase, platelet involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624775:7,325,032...7,390,200
Ensembl chrNW_004624775:7,324,662...7,390,271
JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in ISO (PMID:12189148) UniProt PMID:12189148 NCBI chrNW_004624737:9,088,545...9,096,350
Ensembl chrNW_004624737:9,088,539...9,096,348
JBrowse link
G Pgam2 phosphoglycerate mutase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:7,947,738...7,949,900
Ensembl chrNW_004624740:7,947,742...7,950,956
JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in ISO (PMID:30174313) MGI PMID:30174313 NCBI chrNW_004624836:2,657,320...2,676,124
Ensembl chrNW_004624836:2,653,474...2,676,766
JBrowse link
G Pkm pyruvate kinase M1/2 involved_in ISO (PMID:28630053) MGI PMID:28630053 NCBI chrNW_004624781:1,796,909...1,823,787
Ensembl chrNW_004624781:1,796,801...1,824,144
JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in ISO (PMID:30174313) MGI PMID:30174313 NCBI chrNW_004624860:3,533,226...3,536,786
Ensembl chrNW_004624860:3,533,320...3,539,755
JBrowse link
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 involved_in ISO
IEA
RGD
TreeGrafter
PMID:3010881 GO_REF:0000118 RGD:5133253 NCBI chrNW_004624859:5,452,694...5,495,840 JBrowse link
GDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chrNW_004624937:892,840...898,799
Ensembl chrNW_004624937:892,854...898,799
JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452) UniProt PMID:10858452 NCBI chrNW_004624758:18,670,609...18,697,594
Ensembl chrNW_004624758:18,670,041...18,697,619
JBrowse link
G Nudt18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:17,691,790...17,695,027
Ensembl chrNW_004624758:17,691,803...17,694,945
JBrowse link
GDP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624937:892,840...898,799
Ensembl chrNW_004624937:892,854...898,799
JBrowse link
G Lrguk leucine rich repeats and guanylate kinase domain containing involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624783:2,112,121...2,263,632 JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within ISO (PMID:19696889) MGI PMID:19696889 NCBI chrNW_004624816:4,132,511...4,156,809
Ensembl chrNW_004624816:4,131,752...4,156,749
JBrowse link
glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoa aldolase, fructose-bisphosphate A involved_in IEA TreeGrafter
InterPro
UniProt
GO_REF:0000002 GO_REF:0000041 GO_REF:0000118 NCBI chrNW_004624782:13,183,924...13,189,286 JBrowse link
G Aldob aldolase, fructose-bisphosphate B involved_in IEA TreeGrafter
InterPro
UniProt
Ensembl
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624758:9,868,223...9,880,205
Ensembl chrNW_004624758:9,868,260...9,880,205
JBrowse link
G Aldoc aldolase, fructose-bisphosphate C involved_in IEA TreeGrafter
UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624786:1,158,270...1,162,801
Ensembl chrNW_004624786:1,158,248...1,162,916
JBrowse link
G Bpgm bisphosphoglycerate mutase involved_in IEA Ensembl
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004624765:15,139,919...15,162,721
Ensembl chrNW_004624765:15,145,011...15,163,978
JBrowse link
G Col6a1 collagen type VI alpha 1 chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23437220) Ensembl
MGI
PMID:23437220 GO_REF:0000107 NCBI chrNW_004624745:31,125,136...31,140,126
Ensembl chrNW_004624745:31,125,265...31,139,318
JBrowse link
G Eno1 enolase 1 involved_in IEA TreeGrafter
InterPro
UniProt
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624818:3,223,384...3,235,128
Ensembl chrNW_004624818:3,223,308...3,238,419
JBrowse link
G Eno2 enolase 2 involved_in IEA TreeGrafter
UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624860:3,553,936...3,561,343
Ensembl chrNW_004624860:3,553,947...3,564,294
JBrowse link
G Eno3 enolase 3 involved_in IEA TreeGrafter
UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624786:8,807,498...8,813,561
Ensembl chrNW_004624786:8,807,450...8,813,951
JBrowse link
G Eno4 enolase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23446454) TreeGrafter
MGI
UniProt
InterPro
PMID:23446454 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624737:29,655,799...29,758,109
Ensembl chrNW_004624737:29,655,579...29,758,186
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:29259245) MGI PMID:29259245 NCBI chrNW_004624753:5,918,005...5,983,480
Ensembl chrNW_004624753:5,917,689...5,982,308
JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO (PMID:31296900) MGI PMID:31296900 NCBI chrNW_004624832:6,849,001...6,858,931
Ensembl chrNW_004624832:6,849,005...6,857,898
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in IEA
ISO
TreeGrafter
UniProt
RGD
PMID:28258188 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:13792662 NCBI chrNW_004624860:3,257,805...3,261,736
Ensembl chrNW_004624860:3,257,853...3,261,735
JBrowse link
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15546993), (PMID:19759366) TreeGrafter
MGI
PMID:15546993 PMID:19759366 GO_REF:0000118 NCBI chrNW_004624794:8,064,074...8,072,875
Ensembl chrNW_004624794:8,064,074...8,067,392
JBrowse link
G Gck glucokinase involved_in ISO
IEA
RGD
InterPro
UniProt
TreeGrafter
PMID:4273555 PMID:4353083 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:2302790 RGD:2302851 NCBI chrNW_004624740:7,844,496...7,885,900
Ensembl chrNW_004624740:7,852,390...7,886,758
JBrowse link
G Gpi glucose-6-phosphate isomerase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8417789)
(PMID:15665293)
TreeGrafter
MGI
UniProt
InterPro
PMID:8417789 PMID:15665293 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624794:8,826,281...8,851,614
Ensembl chrNW_004624794:8,823,449...8,851,625
JBrowse link
G Hk1 hexokinase 1 involved_in IEA
ISO
TreeGrafter
UniProt
InterPro
RGD
PMID:4353083 PMID:15574336 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:1358232 RGD:2302851 NCBI chrNW_004624754:3,594,478...3,656,231
Ensembl chrNW_004624754:3,591,090...3,659,760
JBrowse link
G Hk2 hexokinase 2 involved_in IEA TreeGrafter
UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624749:28,618,146...28,718,852
Ensembl chrNW_004624749:28,618,030...28,689,794
JBrowse link
G Hk3 hexokinase 3 involved_in IEA TreeGrafter
InterPro
UniProt
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624733:13,245,822...13,262,300
Ensembl chrNW_004624733:13,245,845...13,262,184
JBrowse link
G Hkdc1 hexokinase domain containing 1 involved_in IEA TreeGrafter
UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624754:3,511,947...3,556,131
Ensembl chrNW_004624754:3,511,730...3,556,184
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A acts_upstream_of
involved_in
ISO
IEA
(PMID:17408640) MGI
Ensembl
PMID:17408640 GO_REF:0000107 NCBI chrNW_004624748:8,154,288...8,223,226
Ensembl chrNW_004624748:8,155,107...8,223,259
JBrowse link
G Ier3 immediate early response 3 acts_upstream_of ISO (PMID:19096392) MGI PMID:19096392 NCBI chrNW_004624754:24,991,650...24,992,645
Ensembl chrNW_004624754:24,991,690...24,992,643
JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:25807535) MGI PMID:25807535 NCBI chrNW_004624737:49,471...82,981
Ensembl chrNW_004624737:49,371...83,514
JBrowse link
G LOC101704135 phosphoglycerate mutase 1-like involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624780:217,302...218,868 JBrowse link
G LOC101714576 phosphoglycerate mutase 1-like involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624794:785,630...786,422 JBrowse link
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 involved_in ISO (PMID:11069105) UniProt PMID:11069105 NCBI chrNW_004624807:4,420,577...4,442,842
Ensembl chrNW_004624807:4,420,047...4,443,370
JBrowse link
G Pfkl phosphofructokinase, liver type involved_in ISO
IEA
RGD
UniProt
Ensembl
InterPro
PMID:2931076 PMID:4273555 PMID:4353083 PMID:6458283 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 RGD:2301239 RGD:2302736 RGD:2302790 RGD:2302851 NCBI chrNW_004624745:29,826,202...29,842,859
Ensembl chrNW_004624745:29,823,317...29,842,881
JBrowse link
G Pfkm phosphofructokinase, muscle involved_in ISO
IEA
RGD
InterPro
UniProt
PMID:2931076 PMID:8593533 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 RGD:1599363 RGD:2302736 NCBI chrNW_004624816:4,132,511...4,156,809
Ensembl chrNW_004624816:4,131,752...4,156,749
JBrowse link
G Pfkp phosphofructokinase, platelet involved_in ISO
IEA
RGD
InterPro
UniProt
PMID:2931076 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 RGD:2302736 NCBI chrNW_004624775:7,325,032...7,390,200
Ensembl chrNW_004624775:7,324,662...7,390,271
JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in IEA Ensembl
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004624737:9,088,545...9,096,350
Ensembl chrNW_004624737:9,088,539...9,096,348
JBrowse link
G Pgam2 phosphoglycerate mutase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15665293) InterPro
MGI
UniProt
Ensembl
PMID:15665293 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004624740:7,947,738...7,949,900
Ensembl chrNW_004624740:7,947,742...7,950,956
JBrowse link
G Pgk1 phosphoglycerate kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15665293) RGD
MGI
UniProt
InterPro
TreeGrafter
PMID:3091090 PMID:6405813 PMID:15665293 GO_REF:0000002 GO_REF:0000041 GO_REF:0000117 GO_REF:0000118 RGD:2302859 RGD:2302860 NCBI chrNW_004624836:2,657,320...2,676,124
Ensembl chrNW_004624836:2,653,474...2,676,766
JBrowse link
G Pgk2 phosphoglycerate kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19759366) TreeGrafter
MGI
UniProt
InterPro
PMID:19759366 GO_REF:0000002 GO_REF:0000041 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624799:14,621,413...14,623,050
Ensembl chrNW_004624799:14,621,673...14,622,926
JBrowse link
G Pklr pyruvate kinase L/R involved_in IEA
ISO
TreeGrafter
UniProt
InterPro
RGD
PMID:4273555 PMID:4353083 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:2302790 RGD:2302851 NCBI chrNW_004624885:2,261,850...2,272,175
Ensembl chrNW_004624885:2,264,928...2,272,171
JBrowse link
G Pkm pyruvate kinase M1/2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7262549), (PMID:7295297) TreeGrafter
MGI
UniProt
InterPro
RGD
PMID:4273555 PMID:7262549 PMID:7295297 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:2302790 NCBI chrNW_004624781:1,796,909...1,823,787
Ensembl chrNW_004624781:1,796,801...1,824,144
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of ISO (PMID:20935145) MGI PMID:20935145 NCBI chrNW_004624860:1,416,419...1,455,953
Ensembl chrNW_004624860:1,417,131...1,457,717
JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in IEA TreeGrafter
UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624860:3,533,226...3,536,786
Ensembl chrNW_004624860:3,533,320...3,539,755
JBrowse link
G Ucp2 uncoupling protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:3,067,358...3,075,045
Ensembl chrNW_004624817:3,067,320...3,075,043
JBrowse link
glycolytic process from galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galk1 galactokinase 1 acts_upstream_of_or_within ISO (PMID:10915771) MGI PMID:10915771 NCBI chrNW_004624801:5,646,112...5,649,822
Ensembl chrNW_004624801:5,646,239...5,650,214
JBrowse link
G Galt galactose-1-phosphate uridylyltransferase acts_upstream_of_or_within ISO (PMID:11286504) MGI PMID:11286504 NCBI chrNW_004624736:39,040,139...39,043,449
Ensembl chrNW_004624736:39,040,009...39,043,444
JBrowse link
glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkl phosphofructokinase, liver type involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8172601), (PMID:9287040) Ensembl
MGI
PMID:8172601 PMID:9287040 GO_REF:0000107 NCBI chrNW_004624745:29,826,202...29,842,859
Ensembl chrNW_004624745:29,823,317...29,842,881
JBrowse link
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
ISO (PMID:25796446)
(PMID:17595219)
(PMID:2521854)
(PMID:19889946)
CAFA
MGI
PMID:2521854 PMID:17595219 PMID:19889946 PMID:25796446 NCBI chrNW_004624816:4,132,511...4,156,809
Ensembl chrNW_004624816:4,131,752...4,156,749
JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3759354|PMID:17828264) UniProt PMID:17828264 MGI:3759354 NCBI chrNW_004624767:19,844,996...19,859,274
Ensembl chrNW_004624767:19,844,884...19,858,950
JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in ISO (PMID:23840896) UniProt PMID:23840896 NCBI chrNW_004624746:716,848...773,169
Ensembl chrNW_004624746:716,836...773,169
JBrowse link
G Ddit4 DNA damage inducible transcript 4 acts_upstream_of_or_within ISO (PMID:20176937) MGI PMID:20176937 NCBI chrNW_004624754:6,091,914...6,094,035
Ensembl chrNW_004624754:6,091,809...6,094,525
JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in ISO (PMID:25043030)
(PMID:19881551)
CAFA
UniProt
PMID:19881551 PMID:25043030 NCBI chrNW_004624753:16,019,546...16,048,096
Ensembl chrNW_004624753:16,016,022...16,048,104
JBrowse link
G Flcn folliculin involved_in ISO (PMID:34381247) UniProt PMID:34381247 NCBI chrNW_004624849:4,157,683...4,179,724 JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISO (MGI:6478067|PMID:32460388) UniProt PMID:32460388 MGI:6478067 NCBI chrNW_004624786:2,071,376...2,086,929
Ensembl chrNW_004624786:2,071,382...2,086,910
JBrowse link
G Hdac4 histone deacetylase 4 involved_in ISO (MGI:4365327|PMID:19109424) BHF-UCL PMID:19109424 MGI:4365327 NCBI chrNW_004624847:3,846,196...4,101,537
Ensembl chrNW_004624847:3,845,858...4,101,487
JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO (PMID:19096392) MGI PMID:19096392 NCBI chrNW_004624754:24,991,650...24,992,645
Ensembl chrNW_004624754:24,991,690...24,992,643
JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (PMID:26219591) MGI PMID:26219591 NCBI chrNW_004624767:1,199,367...1,218,425
Ensembl chrNW_004624767:1,199,291...1,221,123
JBrowse link
G Myog myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chrNW_004624807:7,742,926...7,753,149
Ensembl chrNW_004624807:7,749,852...7,753,336
JBrowse link
G Ncor1 nuclear receptor corepressor 1 involved_in ISO (PMID:19955185) BHF-UCL PMID:19955185 NCBI chrNW_004624877:4,203,125...4,379,891
Ensembl chrNW_004624877:4,233,282...4,377,211
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISO (PMID:30451898) UniProt PMID:30451898 NCBI chrNW_004624782:13,042,938...13,044,298
Ensembl chrNW_004624782:13,042,939...13,044,267
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:3,646,499...3,702,553
Ensembl chrNW_004624752:3,650,922...3,701,672
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22343369 RGD:7242186 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297
JBrowse link
G Sik2 salt inducible kinase 2 involved_in ISO (PMID:21084751) MGI PMID:21084751 NCBI chrNW_004624784:6,728,504...6,900,557
Ensembl chrNW_004624784:6,745,595...6,895,747
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:26456828)
(MGI:4881401|PMID:20141841), (MGI:5619441|PMID:23217706)
UniProt
CACAO
PMID:20141841 PMID:23217706 PMID:26456828 MGI:4881401 MGI:5619441 NCBI chrNW_004624828:5,441,973...5,449,549
Ensembl chrNW_004624828:5,442,057...5,451,520
JBrowse link
G Stat3 signal transducer and activator of transcription 3 acts_upstream_of_or_within ISO (PMID:22891351) MGI PMID:22891351 NCBI chrNW_004624795:1,648,235...1,680,788
Ensembl chrNW_004624795:1,648,080...1,681,200
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20935145) TreeGrafter
MGI
PMID:20935145 GO_REF:0000118 NCBI chrNW_004624860:1,416,419...1,455,953
Ensembl chrNW_004624860:1,417,131...1,457,717
JBrowse link
G Trim63 tripartite motif containing 63 involved_in ISO (PMID:34244144) FlyBase PMID:34244144 NCBI chrNW_004624764:10,126,345...10,139,829
Ensembl chrNW_004624764:10,128,751...10,139,687
JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkfb1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 involved_in ISO (PMID:15331593)
(PMID:16155866)
MGI PMID:15331593 PMID:16155866 NCBI chrNW_004624910:303,697...380,491
Ensembl chrNW_004624910:305,068...380,188
JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:38,012,694...38,033,745
Ensembl chrNW_004624733:38,012,392...38,036,914
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO (PMID:16155866)
(PMID:23292513)
MGI PMID:16155866 PMID:23292513 NCBI chrNW_004624901:1,319,426...1,336,848
Ensembl chrNW_004624901:1,319,062...1,336,744
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) acts_upstream_of_or_within ISO (PMID:18698006) MGI PMID:18698006 NCBI chrNW_004624795:739,821...752,773
Ensembl chrNW_004624795:743,646...752,103
JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372
JBrowse link
G Esrrb estrogen related receptor beta involved_in ISO PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chrNW_004624734:25,261,493...25,369,092
Ensembl chrNW_004624734:25,261,493...25,430,045
JBrowse link
G Gck glucokinase ISO RGD PMID:17553851 RGD:2301905 NCBI chrNW_004624740:7,844,496...7,885,900
Ensembl chrNW_004624740:7,852,390...7,886,758
JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within ISO (PMID:11147825) MGI PMID:11147825 NCBI chrNW_004624816:2,203,731...2,211,006
Ensembl chrNW_004624816:2,203,731...2,210,509
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17408640) MGI
Ensembl
PMID:17408640 GO_REF:0000107 NCBI chrNW_004624748:8,154,288...8,223,226
Ensembl chrNW_004624748:8,155,107...8,223,259
JBrowse link
G Ifng interferon gamma involved_in ISO (MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:6304699 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534
JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (PMID:7688386) BHF-UCL PMID:7688386 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300
JBrowse link
G Ins insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:14,999,088...15,000,035
Ensembl chrNW_004624767:14,999,088...15,000,035
JBrowse link
G Insr insulin receptor involved_in ISO (PMID:7693131) BHF-UCL PMID:7693131 NCBI chrNW_004624828:345,135...485,856
Ensembl chrNW_004624828:345,135...486,184
JBrowse link
G Kat2b lysine acetyltransferase 2B involved_in ISO (PMID:21084751) MGI PMID:21084751 NCBI chrNW_004624821:5,387,212...5,489,013 JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:11086030 RGD:1642010 NCBI chrNW_004624747:10,307,826...10,308,649
Ensembl chrNW_004624747:10,303,919...10,308,821
JBrowse link
G Mlx MAX dimerization protein MLX involved_in ISO (PMID:14742444) MGI PMID:14742444 NCBI chrNW_004624795:1,539,935...1,543,600
Ensembl chrNW_004624795:1,539,935...1,543,115
JBrowse link
G Mlxipl MLX interacting protein like involved_in ISO (MGI:3041761|PMID:15118080)
(PMID:14742444)
(PMID:19995986)
BHF-UCL
MGI
PMID:14742444 PMID:15118080 PMID:19995986 MGI:3041761 NCBI chrNW_004624740:14,150,425...14,187,687
Ensembl chrNW_004624740:14,168,238...14,187,264
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chrNW_004624735:27,780,338...27,784,714
Ensembl chrNW_004624735:27,780,037...27,784,806
JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in ISO (PMID:22898868) CACAO PMID:22898868 NCBI chrNW_004624747:21,725,813...21,768,123
Ensembl chrNW_004624747:21,725,395...21,759,453
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chrNW_004624759:14,143,439...14,174,971
Ensembl chrNW_004624759:14,142,956...14,171,718
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chrNW_004624862:3,443,720...3,496,078
Ensembl chrNW_004624862:3,450,078...3,496,142
JBrowse link
G Prxl2c peroxiredoxin like 2C involved_in ISO (PMID:29901208) UniProt PMID:29901208 NCBI chrNW_004624753:17,901,281...17,922,146
Ensembl chrNW_004624753:17,901,544...17,918,042
JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
G Slc4a4 solute carrier family 4 member 4 acts_upstream_of ISO (PMID:21976511)
(MGI:5295108|PMID:21976511)
ARUK-UCL PMID:21976511 MGI:5295108 NCBI chrNW_004624890:2,523,368...2,940,081
Ensembl chrNW_004624890:2,523,327...2,919,148
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:35263589) UniProt PMID:35263589 NCBI chrNW_004624842:2,212,561...2,260,514
Ensembl chrNW_004624842:2,211,020...2,230,132
JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 involved_in ISO (PMID:34244144) FlyBase PMID:34244144 NCBI chrNW_004624761:25,786,028...25,797,641
Ensembl chrNW_004624761:25,784,257...25,797,549
JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:33,307,686...34,202,576
Ensembl chrNW_004624731:34,108,927...34,172,231
JBrowse link
positive regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkfb1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 involved_in ISO PMID:12230553 FlyBase PMID:12230553 RGD:405650381 NCBI chrNW_004624910:303,697...380,491
Ensembl chrNW_004624910:305,068...380,188
JBrowse link
purine ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 acts_upstream_of_or_within ISO (PMID:11929769) MGI PMID:11929769 NCBI chrNW_004624737:7,011,792...7,193,903
Ensembl chrNW_004624737:7,084,818...7,191,918
JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 acts_upstream_of_or_within ISO (PMID:11929769) MGI PMID:11929769 NCBI chrNW_004624760:859,598...865,194
Ensembl chrNW_004624760:859,637...866,804
JBrowse link
regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl2 ADP ribosylation factor like GTPase 2 involved_in ISO (PMID:30945270) UniProt PMID:30945270 NCBI chrNW_004624767:21,363,110...21,377,415
Ensembl chrNW_004624767:21,370,917...21,377,425
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within
involved_in
ISO (PMID:17437992)
(PMID:32697943)
MGI
UniProt
PMID:17437992 PMID:32697943 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705
JBrowse link
G Jmjd8 jumonji domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624913:1,494,168...1,495,864
Ensembl chrNW_004624913:1,494,168...1,495,801
JBrowse link
G Mlxipl MLX interacting protein like ISO RGD PMID:11724780 RGD:634534 NCBI chrNW_004624740:14,150,425...14,187,687
Ensembl chrNW_004624740:14,168,238...14,187,264
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:22923583) UniProt PMID:22923583 NCBI chrNW_004624903:1,863,110...1,912,299
Ensembl chrNW_004624903:1,863,337...1,910,177
JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:9,088,545...9,096,350
Ensembl chrNW_004624737:9,088,539...9,096,348
JBrowse link
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in ISO (PMID:15877279) BHF-UCL PMID:15877279 NCBI chrNW_004624800:4,969,010...5,207,941
Ensembl chrNW_004624800:4,968,866...5,207,501
JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within ISO (PMID:15857891) MGI PMID:15857891 NCBI chrNW_004624823:6,184,970...6,196,535
Ensembl chrNW_004624823:6,184,801...6,192,654
JBrowse link
G Slc2a6 solute carrier family 2 member 6 involved_in ISO (MGI:6276413|PMID:30431159)
(PMID:30431159)
UniProt PMID:30431159 MGI:6276413 NCBI chrNW_004624760:1,897,960...1,903,484
Ensembl chrNW_004624760:1,898,427...1,903,445
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:28069950) MGI PMID:28069950 NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624828:5,529,351...5,548,481
Ensembl chrNW_004624828:5,530,543...5,545,902
JBrowse link
ribonucleoside diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak4 adenylate kinase 4 involved_in ISO (PMID:24767988) UniProt PMID:24767988 NCBI chrNW_004624742:29,547,237...29,574,160 JBrowse link
ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt5 nudix hydrolase 5 involved_in ISO (PMID:18462755), (PMID:19699693), (PMID:21389046) UniProt PMID:18462755 PMID:19699693 PMID:21389046 NCBI chrNW_004624805:4,903,250...4,922,719
Ensembl chrNW_004624805:4,903,373...4,915,846
JBrowse link
UDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO (PMID:25678555) MGI PMID:25678555 NCBI chrNW_004624738:9,318,213...9,340,765
Ensembl chrNW_004624738:9,318,232...9,340,925
JBrowse link
G Cmpk1 cytidine/uridine monophosphate kinase 1 involved_in ISO
IEA
RGD
TreeGrafter
PMID:3010881 GO_REF:0000118 RGD:5133253 NCBI chrNW_004624859:5,452,694...5,495,840 JBrowse link
G Dhodh dihydroorotate dehydrogenase (quinone) involved_in ISO (PMID:30449682), (PMID:6249586) MGI PMID:6249586 PMID:30449682 NCBI chrNW_004624746:14,254,811...14,268,034
Ensembl chrNW_004624746:14,254,193...14,268,034
JBrowse link
G Umps uridine monophosphate synthetase involved_in ISO (PMID:2419341)
(PMID:6154574)
MGI PMID:2419341 PMID:6154574 NCBI chrNW_004624731:761,235...780,355
Ensembl chrNW_004624731:761,210...779,321
JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624758:18,670,609...18,697,594
Ensembl chrNW_004624758:18,670,041...18,697,619
JBrowse link
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) involved_in ISO (MGI:1927266|PMID:10369669), (MGI:4881347|PMID:21074248) UniProt PMID:10369669 PMID:21074248 MGI:1927266 MGI:4881347 NCBI chrNW_004624734:27,568,738...27,610,046
Ensembl chrNW_004624734:27,570,815...27,610,766
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15089
    metabolic process 9076
      small molecule metabolic process 1538
        nucleobase-containing small molecule metabolic process 549
          nucleoside phosphate metabolic process 494
            nucleoside diphosphate metabolic process 120
              ribonucleoside diphosphate metabolic process 115
                purine ribonucleoside diphosphate metabolic process + 105
                pyrimidine ribonucleoside diphosphate metabolic process + 6
                ribonucleoside diphosphate biosynthetic process + 9
                ribonucleoside diphosphate catabolic process + 101
Path 2
Term Annotations click to browse term
  biological_process 15089
    metabolic process 9076
      organic substance metabolic process 8658
        organic cyclic compound metabolic process 4854
          nucleobase-containing compound metabolic process 4436
            nucleobase-containing small molecule metabolic process 549
              nucleoside phosphate metabolic process 494
                nucleoside diphosphate metabolic process 120
                  ribonucleoside diphosphate metabolic process 115
                    purine ribonucleoside diphosphate metabolic process + 105
                    pyrimidine ribonucleoside diphosphate metabolic process + 6
                    ribonucleoside diphosphate biosynthetic process + 9
                    ribonucleoside diphosphate catabolic process + 101
paths to the root